INO
CNR
vai_a_storia   vai_a_organizzazione   vai_a_sedi   vai_a_personale   Area Riservata
    English English Version  
 
 

High-fidelity imaging in brain-wide structural studies using light-sheet microscopy

  Articoli su Riviste JCR/ISI  (anno 2018)

Autori:  Müllenbroich M.C., Silvestri L., Di Giovanna A.P., Mazzamuto G., Costantini I., Sacconi L., Pavone F

Affiliazione Autori:  National Institute of Optics, National Research Council, Sesto Fiorentino, 50019, Italy; European Laboratory for Non-Linear Spectroscopy, LENS, Sesto Fiorentino, 50019, Italy; University of Florence, Italy; Department of Physics and Astronomy, University of Florence, Sesto Fiorentino, 50019, Italy

Riassunto:  Light-sheet microscopy (LSM) has proven a useful tool in neuroscience to image whole brains with high frame rates at cellular resolution and, in combination with tissue clearing methods, is often employed to reconstruct the cyto-architecture over the intact mouse brain. Inherently to LSM, however, residual opaque objects, always present to some extent even in extremely well optically cleared samples, cause stripe artifacts, which, in the best case, severely affect image homogeneity and, in the worst case, completely obscure features of interest. Here, demonstrating two example applications in intact optically cleared mouse brains, we report how Bessel beams reduce streaking artifacts and produce high-fidelity structural data for the brain-wide morphology of neuronal and vascular networks. We found that a third of the imaged volume of the brain was affected by strong striated image intensity inhomogeneity and, furthermore, a significant amount of information content lost with Gaussian illumination was accessible when interrogated with Bessel beams. In conclusion, Bessel beams produce high-fidelity structural data of improved image homogeneity and might significantly relax demands placed on the automated tools to count, trace, or segment fluorescent features of interest.

Rivista/Giornale:  ENEURO
Volume n.:  5 (6)      Pagine da: e0124-1  a: e0124 -13
Ulteriori informazioni:  This project was supported by European Union’s H2020 Research and Innovation Programme Grants 720270 (Human Brain Project) and 654148 (Laserlab-Europe) and by the European Union’s Programme H2020 EXCEL-LENT SCIENCE-European Research Council (ERC) Grant 692943 (BrainBIT). The project has also been supported by the Italian Ministry for Education, University, and Research in the framework of the Flagship Project NanoMAX of Eurobioimaging Italian Nodes (ESFRI research infrastructure), and by “Ente Cassa di Risparmio di Firenze” (private foundation). Müllenbroich’s present address: School of Physics, Kelvin Building, University of Glasgow, G12 8QQ Glasgow, Scotland, United Kingdom. Acknowledgements: We thank Riccardo Ballerini and Ahmed Hajeb from the mechanical workshop at LENS for the production of custom pieces and advise on structural stability in sample mounting.
DOI: 10.1523/ENEURO.0124-18.2018


INO © Istituto Nazionale di Ottica - Largo Fermi 6, 50125 Firenze | Tel. 05523081 Fax 0552337755 - P.IVA 02118311006     P.E.C.    Info